STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090M607Exoribonuclease, phosphorolytic domain 2. (237 aa)    
Predicted Functional Partners:
A0A090N3I5
Exosome complex RNA-binding protein 1/RRP40/RRP4.
   
 0.993
Q00YJ4_OSTTA
Exoribonuclease, phosphorolytic domain 1.
 
 0.986
A0A090LYI7
Exoribonuclease, phosphorolytic domain 2.
  
 0.985
A0A090LYL7
Exoribonuclease, phosphorolytic domain 2.
  
 0.981
Q015H8_OSTTA
Exosome complex component CSL4.
   
 0.976
A0A090M8X4
Exoribonuclease, phosphorolytic domain 2.
   
 0.974
A0A090M712
Ribonuclease H-like domain.
   
 0.971
A0A090MBV4
Exoribonuclease, phosphorolytic domain 2.
  
 
 
0.969
A0A090M3F7
Sas10/Utp3/C1D.
   
 0.966
A0A090M0L9
Translation elongation/initiation factor/Ribosomal, beta-barrel.
    
 0.892
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.