STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090M8M8Unnamed product. (254 aa)    
Predicted Functional Partners:
A0A090M872
Vesicle transport protein, Use1.
   
 0.999
A0A096PC09
Synaptobrevin; Belongs to the synaptobrevin family.
   
 0.996
A0A096PB14
RZZ complex, subunit Zw10.
    
 0.992
A0A096PAS0
Sec20.
    
 0.980
A0A096P9G6
Unnamed product.
    
 0.974
Q01F80_OSTTA
RINT-1/TIP-1.
    
 0.972
Q00RY7_OSTTA
Tetratricopeptide-like helical.
    
 0.960
A0A090M751
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.928
A0A090MC89
Syntaxin/epimorphin, conserved site; Belongs to the syntaxin family.
   
 0.928
Q00WA1_OSTTA
Calcium/calmodulin-dependent/calcium-dependent protein kinase.
    
 0.898
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.