STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090M8S5Helicase, C-terminal. (1217 aa)    
Predicted Functional Partners:
A0A090N464
G-protein beta WD-40 repeat.
   
 0.999
A0A096PBG3
Pre-mRNA splicing Prp18-interacting factor.
   
 0.998
A0A090M8Q3
Pre-mRNA splicing factor.
    
 0.990
A0A090LXV5
MIF4-like, type 1/2/3.
   
 0.989
Q00RS3_OSTTA
Tetratricopeptide repeat.
   
 0.976
A0A090M0R5
Uncharacterized protein.
 
 
 0.974
Q015X0_OSTTA
Translation elongation/initiation factor/Ribosomal, beta-barrel.
    
 
 0.971
A0A090M9I4
Tetratricopeptide repeat-containing domain.
   
 0.969
A0A090N4A3
RNA recognition motif, spliceosomal PrP8.
   
 
 0.969
A0A090M336
G-patch domain.
   
 0.967
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.