STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090M906Armadillo-type fold. (1098 aa)    
Predicted Functional Partners:
A0A096P7J6
WD40 repeat.
    
 0.678
A0A090M451
Serine/threonine-protein kinase.
    
 0.672
A0A090M6C3
Mad3/BUB1 homology region 1.
     
 0.663
A0A090M0E4
WD40/YVTN repeat-like-containing domain.
     
 0.595
A0A096P885
WD40 repeat.
     
 0.595
A0A090MBI8
Peptidase C50, separase.
     
 0.568
Q00VZ0_OSTTA
DNA-binding HORMA.
     
 0.555
Q01EP8_OSTTA
Small GTPase superfamily, Rab type.
    
 0.502
A0A090N308
Microtubule-associated protein RP/EB.
    
 
 0.480
A0A096PB59
EB1, C-terminal.
    
 
 0.480
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.