STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090M9K1RNA polymerase Rpb7, N-terminal. (178 aa)    
Predicted Functional Partners:
A0A090M3Y9
RNA polymerase II, Rpb4, core.
   
 0.999
A0A090M4Y9
DNA-directed RNA polymerase RPB5 subunit,eukaryote/virus.
   
 0.999
A0A090M528
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.999
A0A090M9E6
RNA polymerase, Rpb8.
   
 0.999
A0A090M9X4
RNA polymerases, subunit N, zinc binding site.
   
 0.999
A0A090N4N0
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.999
Q01EI8_OSTTA
RNA polymerase archaeal subunit P/eukaryotic subunit RPC10.
   
 0.999
Q01F02_OSTTA
DNA-directed RNA polymerase, 30-40kDa subunit,conserved site.
   
 0.999
Q01F81_OSTTA
DNA-directed RNA polymerase, subunit K/Rpb6.
   
 0.999
Q01ET3_OSTTA
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
   
 0.992
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.