STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090M9Z5Metalloenzyme, LuxS/M16 peptidase-like. (1189 aa)    
Predicted Functional Partners:
A0A090M2Y5
Ubiquitin supergroup.
    
  0.648
A0A090M8F9
Ubiquitin supergroup.
    
  0.563
A0A090MAA1
Tetratricopeptide repeat.
   
 
 0.486
Q00ZW8_OSTTA
Short-chain dehydrogenase/reductase SDR.
     
 0.451
A0A090M3X7
Peptidase S9, prolyl oligopeptidase, catalytic domain.
    
 
 0.432
Q00U23_OSTTA
Acetolactate synthase.
     
 0.414
A0A096P9N6
UBA-like.
   
  0.412
A0A090M2V3
Superoxide dismutase, Nickel-type.
    
  0.410
A0A090MAA5
Sde2 N-terminal domain.
    
  0.410
A0A090MCP0
Ubiquitin conserved site.
    
  0.410
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.