STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090MA96Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote. (1554 aa)    
Predicted Functional Partners:
A0A090MAA5
Sde2 N-terminal domain.
    
 0.677
A0A090M454
Small-subunit processome, Utp14.
   
 0.621
Q01F67_OSTTA
WD40 repeat.
   
 0.606
A0A090M9N9
Nrap protein.
   
  0.587
A0A096P8I1
Nucleolar complex protein 4.
   
  0.585
A0A090N386
WD40 repeat.
   
  0.584
A0A090LY89
WD40/YVTN repeat-like-containing domain.
   
  0.560
A0A090M4X4
Suppressor of forked.
  
 0.555
A0A096P7T9
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.551
A0A090N3P6
Rhodanese-like domain.
    
 0.549
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.