STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090MAL2E3 ubiquitin protein ligase. (132 aa)    
Predicted Functional Partners:
A0A096PBX8
Ubiquitin-conjugating enzyme, active site; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.903
A0A090MEQ9
Histone H2B; Belongs to the histone H2B family.
    
 0.709
A0A090M5U5
RNA polymerase II accessory factor, Cdc73.
   
 0.693
A0A090LYE5
RNA polymerase II-associated, Paf1.
    
 0.674
A0A096P9E3
Leo1-like protein.
   
 0.661
A0A090N346
Tetratricopeptide repeat.
   
 0.656
A0A090MCM2
HECT.
   
  
 0.654
A0A096P8M9
Zinc finger, CW-type.
   
 
 0.612
A0A096PBK6
Plus-3.
   
 0.544
A0A090LZE4
E3 ubiquitin protein ligase.
     
 
0.540
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.