STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090MBV2Lysine--tRNA ligase. (621 aa)    
Predicted Functional Partners:
A0A096PBU2
Lysine--tRNA ligase.
  
  
 
0.907
A0A096PBZ6
Peptide chain release factor class I/class II.
  
 
 0.861
A0A090N2T0
Glutamyl-tRNA synthetase, class Ib,archaeal/eukaryotic cytosolic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.847
A0A090M3I4
Glutamyl/glutaminyl-tRNA synthetase, class Ib,anti-codon binding domain; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.846
Q01EL4_OSTTA
Aminoacyl-tRNA synthetase, class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.843
A0A090N4M3
Arginine-tRNA ligase, class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.832
A0A090N353
Aminoacyl-tRNA synthetase, class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.823
A0A090LZK5
Isoleucine-tRNA ligase, type 1; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.784
A0A096P8J6
Asparagine synthase.
  
  
 0.776
Q00VE7_OSTTA
Proline-tRNA ligase, class IIa.
  
 0.768
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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