STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090MC47Peptidase M20, dimerisation domain. (446 aa)    
Predicted Functional Partners:
A0A096P8Y7
Argininosuccinate synthase.
  
 0.964
A0A096PC22
Pyridoxal phosphate-dependent transferase, major region, subdomain 1; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.950
A0A090MEV3
Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.
   
 
 0.943
A0A090M3J3
Ornithine/putrescine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
 0.936
A0A090LZZ5
P-loop containing nucleoside triphosphate hydrolase.
    
  0.903
A0A096P8B0
Flavoprotein pyridine nucleotide cytochrome reductase.
   
 
  0.900
A0A096PBR8
N-acetyl-gamma-glutamyl-phosphate reductase, type 2.
  
 
 0.848
A0A090M5C1
Aldehyde dehydrogenase, C-terminal.
     
 0.723
A0A090LZC9
Oxoglutarate/iron-dependent dioxygenase.
  
 
 0.625
A0A090M2Y4
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
  
 0.614
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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