STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090MCD3Alkyl transferase; Belongs to the UPP synthase family. (369 aa)    
Predicted Functional Partners:
A0A096P7M1
Decaprenyl diphosphate synthase-like.
   
 0.898
A0A090M246
Peptidase M50, putative membrane-associated zinc metallopeptidase.
  
  
 0.656
A0A090M5C1
Aldehyde dehydrogenase, C-terminal.
     
 0.647
A0A090M7N9
Ribosomal protein S1, RNA-binding domain.
  
    0.645
A0A096P810
Uridylate kinase.
  
  
 0.622
A0A090M3H5
Ribosome recycling factor.
  
  
 0.565
Q01DS4_OSTTA
Ribosome recycling factor.
  
  
 0.565
A0A090N3M5
Proline-tRNA ligase, class IIa.
  
    0.538
Q00VE7_OSTTA
Proline-tRNA ligase, class IIa.
  
    0.538
A0A096P9A3
DNA methylase, N-6 adenine-specific, conserved site.
   
    0.532
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.