STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090MCS2Tetratricopeptide repeat. (261 aa)    
Predicted Functional Partners:
A0A090M5U5
RNA polymerase II accessory factor, Cdc73.
    
 0.521
APC6
Anaphase promoting complex subunit 6/cell division cycle protein 16-like protein.
    
 0.516
A0A096P9E3
Leo1-like protein.
    
 0.515
A0A090MBK4
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.510
Q01DZ2_OSTTA
Anaphase-promoting complex subunit 4 long domain.
    
 0.509
A0A090LYE5
RNA polymerase II-associated, Paf1.
    
 0.508
APC1
Anaphase-promoting complex subunit 1.
    
 0.508
APC5
Anaphase promoting complex subunit 5.
    
 0.501
A0A090N4E6
Zinc finger, RING/FYVE/PHD-type.
    
 0.495
APC2
Anaphase promoting complex subunit 2; Belongs to the cullin family.
    
 0.490
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.