STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090MCY5Carotene isomerase. (699 aa)    
Predicted Functional Partners:
Q00ZM9_OSTTA
Flavin amine oxidase.
     
 0.517
A0A090M4E5
Squalene/phytoene synthase.
  
  
 0.469
A0A096P7T2
Squalene/phytoene synthase.
  
  
 0.469
Q018Q7_OSTTA
Squalene/phytoene synthase.
  
  
 0.469
A0A090MEY5
Squalene/phytoene synthase.
  
  
 0.459
Q01B26_OSTTA
Magnesium chelatase, subunit H, N-terminal.
   
  
 0.435
A0A090M7N0
Pyridine nucleotide-disulphide oxidoreductase,FAD/NAD(P)-binding domain.
  
  
 0.406
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.