STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090MDS1Cold-shock protein, DNA-binding. (72 aa)    
Predicted Functional Partners:
Q00VZ3_OSTTA
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
   
 
 0.470
A0A096P7J4
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
   
 0.463
A0A090M1E8
Nucleotide-binding, alpha-beta plait.
  
 0.449
A0A090M4S1
Ribonucleoprotein LSM domain,eukaryotic/archaea-type.
    
  0.445
A0A096P7C9
Small nuclear ribonucleoprotein G.
    
  0.444
A0A096PBN9
Nuclear cap-binding protein subunit 2.
   
  0.441
A0A090M3P1
Nucleotide-binding, alpha-beta plait.
    
 0.435
Q01F81_OSTTA
DNA-directed RNA polymerase, subunit K/Rpb6.
   
 
 0.434
A0A090M5R7
Ribonucleoprotein LSM domain,eukaryotic/archaea-type.
    
  0.426
A0A090M5C7
Histone-like DNA-binding protein, conserved site; Belongs to the bacterial histone-like protein family.
  
 
 0.419
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.