STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090N3P9Zinc finger, RING/FYVE/PHD-type. (281 aa)    
Predicted Functional Partners:
A0A090M8F9
Ubiquitin supergroup.
    
 0.554
A0A090M2Y5
Ubiquitin supergroup.
    
 0.506
A0A096PAK6
Ubiquitin-conjugating enzyme, active site; Belongs to the ubiquitin-conjugating enzyme family.
  
 0.501
A0A090MCM2
HECT.
     
 0.497
A0A090M1D7
Ubiquitin-conjugating enzyme, active site; Belongs to the ubiquitin-conjugating enzyme family.
  
 
 0.488
A0A090M1V9
Ubiquitin-conjugating enzyme, active site; Belongs to the ubiquitin-conjugating enzyme family.
  
 0.479
A0A090M0M4
Ubiquitin-conjugating enzyme, active site; Belongs to the ubiquitin-conjugating enzyme family.
  
 0.435
A0A090M2K6
Histone core.
  
    0.423
Q010X9_OSTTA
Ubiquitin-conjugating enzyme, E2.
   
  0.409
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.