STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090N446P-loop containing nucleoside triphosphate hydrolase. (345 aa)    
Predicted Functional Partners:
A0A096P8K3
IKI3.
    
 
 0.802
A0A090M873
Quinonprotein alcohol dehydrogenase-like superfamily.
    
 
 0.778
Q00VG8_OSTTA
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
 
 0.767
Q01GW5_OSTTA
Radical SAM.
   
 
 0.744
Q00W61_OSTTA
Elongator complex protein 4.
   
 
 0.679
A0A090M2R8
Nin one binding (NOB1) Zn-ribbon-like; Belongs to the NOB1 family.
   
    0.669
Q014E9_OSTTA
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
    0.613
A0A090LY95
Pyridoxal phosphate-dependent transferase, major region, subdomain 1.
   
 
 0.561
A0A090N352
Flavoprotein.
      
 0.522
A0A096P7B8
Ribosomal protein L30, ferredoxin-like fold domain.
   
 
 0.520
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.