STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090N4P3RAI1-like. (523 aa)    
Predicted Functional Partners:
Q00YJ4_OSTTA
Exoribonuclease, phosphorolytic domain 1.
   
   0.931
A0A090M3E6
ENTH/VHS.
    
 
 0.861
A0A096P9L5
Putative 5-3 exonuclease.
   
 
 0.851
Q016I4_OSTTA
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.
   
 
 0.851
A0A090M2M2
5'-3' exoribonuclease 1.
    
 
 0.535
A0A090M8R3
NUDIX hydrolase, conserved site.
      
 0.527
Q010T8_OSTTA
mRNA cap guanine-N7 methyltransferase.
    
 
 0.478
A0A096PBF3
Ribosomal protein S4/S9, N-terminal.
   
 
 0.424
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.