STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090N4V6Helicase, C-terminal. (2217 aa)    
Predicted Functional Partners:
A0A090N4A3
RNA recognition motif, spliceosomal PrP8.
   
 0.884
A0A090MET6
UBA-like.
    
 0.863
A0A096PAZ0
Tetratricopeptide repeat.
   
 0.835
A0A090N4I1
FACT complex subunit Spt16p/Cdc68p.
    
 0.754
A0A090M4S1
Ribonucleoprotein LSM domain,eukaryotic/archaea-type.
   
 0.732
A0A090MAN9
G-protein beta WD-40 repeat.
   
 0.731
A0A096P7J4
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
   
 0.725
A0A096PBP8
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.716
A0A096P7C9
Small nuclear ribonucleoprotein G.
   
  0.709
A0A096P9N2
Small nuclear ribonucleoprotein Sm D2.
   
 0.707
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.