STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LONM_OSTTALon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (920 aa)    
Predicted Functional Partners:
A0A090N3E8
Tetratricopeptide repeat.
   
 0.770
Q01FQ6_OSTTA
P-loop containing nucleoside triphosphate hydrolase.
 
 
 0.481
A0A090M5C1
Aldehyde dehydrogenase, C-terminal.
      
 0.461
A0A090LZY4
GrpE nucleotide exchange factor, coiled-coil; Belongs to the GrpE family.
  
  
 0.456
Q013F4_OSTTA
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
  
 0.456
Q01GF9_OSTTA
HAD-superfamily hydrolase, subfamily IIB.
  
  
 0.456
A0A090M2Y4
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
  
 0.450
A0A090M2H3
Heat shock protein Hsp33, N-terminal.
  
  
 0.436
A0A090MC89
Syntaxin/epimorphin, conserved site; Belongs to the syntaxin family.
 
      0.434
A0A090LX85
ClpA/B, conserved site 2.
   
 
 0.425
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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