STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A096P8T9Capsular polysaccharide synthesis. (232 aa)    
Predicted Functional Partners:
A0A090M482
Unnamed product.
    
 0.742
A0A096P7K8
Concanavalin A-like lectin/glucanase, subgroup.
   
 0.692
A0A090M4T3
Ankyrin repeat-containing domain.
    
 0.521
A0A090N381
Ankyrin repeat.
    
 0.521
A0A090M681
WD40 repeat.
    
 0.510
A0A090LYB8
SPla/RYanodine receptor SPRY.
    
 0.507
A0A090M839
Serine/threonine-protein kinase, active site.
    
 0.465
A0A090M4K0
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.459
A0A090LYC9
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.454
A0A090MAJ5
WD40 repeat; Belongs to the WD repeat SEC13 family.
    
 0.454
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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