Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| A0A090LYE5 | A0A090M528 | A0A090LYE5 | A0A090M528 | RNA polymerase II-associated, Paf1. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.857 |
| A0A090LYE5 | A0A090M5U5 | A0A090LYE5 | A0A090M5U5 | RNA polymerase II-associated, Paf1. | RNA polymerase II accessory factor, Cdc73. | 0.999 |
| A0A090LYE5 | A0A090N346 | A0A090LYE5 | A0A090N346 | RNA polymerase II-associated, Paf1. | Tetratricopeptide repeat. | 0.999 |
| A0A090LYE5 | A0A096P9E3 | A0A090LYE5 | A0A096P9E3 | RNA polymerase II-associated, Paf1. | Leo1-like protein. | 0.999 |
| A0A090LYE5 | A0A096P9M4 | A0A090LYE5 | A0A096P9M4 | RNA polymerase II-associated, Paf1. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.945 |
| A0A090LYE5 | A0A096PBK6 | A0A090LYE5 | A0A096PBK6 | RNA polymerase II-associated, Paf1. | Plus-3. | 0.992 |
| A0A090LYE5 | Q00XE3_OSTTA | A0A090LYE5 | Q00XE3 | RNA polymerase II-associated, Paf1. | Transcription elongation factor Spt6. | 0.917 |
| A0A090LYE5 | Q00XV3_OSTTA | A0A090LYE5 | Q00XV3 | RNA polymerase II-associated, Paf1. | FACT complex subunit Spt16p/Cdc68p. | 0.987 |
| A0A090LYE5 | Q01ET3_OSTTA | A0A090LYE5 | Q01ET3 | RNA polymerase II-associated, Paf1. | Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family. | 0.930 |
| A0A090LYE5 | Q01F02_OSTTA | A0A090LYE5 | Q01F02 | RNA polymerase II-associated, Paf1. | DNA-directed RNA polymerase, 30-40kDa subunit,conserved site. | 0.909 |
| A0A090M528 | A0A090LYE5 | A0A090M528 | A0A090LYE5 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase II-associated, Paf1. | 0.857 |
| A0A090M528 | A0A090M5U5 | A0A090M528 | A0A090M5U5 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase II accessory factor, Cdc73. | 0.903 |
| A0A090M528 | A0A090N346 | A0A090M528 | A0A090N346 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Tetratricopeptide repeat. | 0.874 |
| A0A090M528 | A0A096P9E3 | A0A090M528 | A0A096P9E3 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Leo1-like protein. | 0.846 |
| A0A090M528 | A0A096P9M4 | A0A090M528 | A0A096P9M4 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.905 |
| A0A090M528 | A0A096PBK6 | A0A090M528 | A0A096PBK6 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Plus-3. | 0.821 |
| A0A090M528 | Q00XE3_OSTTA | A0A090M528 | Q00XE3 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription elongation factor Spt6. | 0.966 |
| A0A090M528 | Q00XV3_OSTTA | A0A090M528 | Q00XV3 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | FACT complex subunit Spt16p/Cdc68p. | 0.952 |
| A0A090M528 | Q01ET3_OSTTA | A0A090M528 | Q01ET3 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family. | 0.988 |
| A0A090M528 | Q01F02_OSTTA | A0A090M528 | Q01F02 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, 30-40kDa subunit,conserved site. | 0.999 |
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