STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A096PAQ3Zinc finger, PHD-finger. (443 aa)    
Predicted Functional Partners:
A0A090M8A6
Ubiquitin-conjugating enzyme, active site; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.629
Q017L5_OSTTA
SUMO-conjugating enzyme Ubc9; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.629
A0A090MCM2
HECT.
      
 0.616
A0A090M8K5
Small ubiquitin-related modifier.
    
 0.573
Q01ES7_OSTTA
Acid phosphatase/vanadium-dependent haloperoxidase-related.
    
 0.573
A0A1Y5I503
DNA topoisomerase I, DNA binding, mixed alpha/beta motif, eukaryotic-type.
   
 
 0.495
Q00T84_OSTTA
Zinc finger, RING/FYVE/PHD-type.
      
 0.434
A0A090N3P4
U4/U6 small nuclear ribonucleoprotein Prp3.
   
  
 0.411
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.