STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A096PB04Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (348 aa)    
Predicted Functional Partners:
A0A096P8M8
Brix domain.
   
 
 0.999
A0A090M5Q6
Nucleotide-binding, alpha-beta plait.
   
 
 0.995
Q00TM0_OSTTA
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 0.986
A0A090MCX8
Eukaryotic rRNA processing.
   
 0.985
A0A090M7M8
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
 0.983
Q01F89_OSTTA
Ribosomal protein L24e, conserved site.
   
 
 0.981
Q01CN9_OSTTA
Ribosome biogenesis protein BRX1.
   
 
 0.970
A0A096PBM9
Nucleolar, Nop52.
   
 0.968
A0A090M674
Ribosomal protein L1, 2-layer alpha/beta-sandwich.
   
   0.964
A0A090M8F4
Armadillo-type fold.
   
 0.962
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.