STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A096PBY2DNA repair protein Rad4. (818 aa)    
Predicted Functional Partners:
A0A090M9K3
UBA-like.
   
 0.999
Q01C90_OSTTA
Helicase, C-terminal.
   
 0.970
Q00TJ6_OSTTA
BSD.
    
 0.946
A0A090MB65
P-loop containing nucleoside triphosphate hydrolase.
    
 0.908
A0A090N4Y1
WD40 repeat.
   
 0.876
A0A090M054
EF-Hand 1, calcium-binding site.
    
 0.868
A0A090M3N9
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase.
    
 0.868
A0A090N3F4
RNA helicase, ATP-dependent, DEAD-box, conserved site.
    
 0.868
Q00XT2_OSTTA
Helix-hairpin-helix motif, class 2.
   
 
 0.846
Q017B7_OSTTA
General transcription factor IIH subunit.
    
 0.843
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.