STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q00TY4_OSTTAZinc finger, C2H2-type matrin. (515 aa)    
Predicted Functional Partners:
A0A096PB46
Zinc finger, C2H2-type matrin.
    
 0.999
A0A090M286
Pre-mRNA splicing factor PRP21-like protein.
   
 0.995
A0A090M7X1
Protein-tyrosine phosphatase, active site.
   
 0.988
A0A096P7F0
Armadillo-type fold.
   
 0.988
A0A090M6M5
Cleavage/polyadenylation specificity factor, A subunit, C-terminal.
   
 0.986
A0A090N3H2
Nucleotide-binding, alpha-beta plait.
    
 0.986
Q011X4_OSTTA
Leucine-rich repeat.
   
 0.986
A0A090M8C4
Helicase, C-terminal.
   
 0.983
A0A090M2F7
Splicing factor subunit; Belongs to the SF3B5 family.
   
 0.979
A0A096P9N2
Small nuclear ribonucleoprotein Sm D2.
   
 0.974
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.