STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q00W70_OSTTARibosomal protein S30Ae/sigma 54 modulation protein. (184 aa)    
Predicted Functional Partners:
A0A090N4J1
Ribosomal protein S19 conserved site; Belongs to the universal ribosomal protein uS19 family.
    
 0.971
A0A090LZP7
Ribosomal protein S3, eukaryotic/archaeal.
    
 0.970
A0A096PBL2
Ribosomal protein L33, conserved site.
   
   0.944
Q00VZ3_OSTTA
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
   
 
 0.944
A0A096PAI1
Ribosomal protein L18/L5.
    
 
 0.939
A0A090M4E6
Ribosomal protein S6.
    
   0.938
A0A090M8Z5
Ribosomal protein L25/L23.
    
   0.938
A0A096P7B8
Ribosomal protein L30, ferredoxin-like fold domain.
    
   0.938
A0A096P7I6
Ribosomal protein S10, eukaryotic/archaeal.
   
  0.877
A0A090M8V6
Ribosomal protein S5/S7, eukaryotic/archaeal; Belongs to the universal ribosomal protein uS7 family.
    
 0.876
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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