STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q014N0_OSTTARibosomal protein L30, ferredoxin-like fold domain. (85 aa)    
Predicted Functional Partners:
Q01FZ8_OSTTA
Ribosomal protein L21.
   
   0.831
Q00RY2_OSTTA
Translation elongation/initiation factor/Ribosomal, beta-barrel; Belongs to the universal ribosomal protein uL3 family.
   
   0.829
A0A096PBW6
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
    
   0.825
Q00T37_OSTTA
Ribosomal protein L15, bacterial-type.
    
   0.823
Q019X7_OSTTA
Ribosomal protein L29.
   
   0.821
A0A090N4C6
Ribosomal protein L4/L1e.
    
   0.807
A0A096P966
Ribosomal protein L25/L23.
    
   0.760
A0A096PAT4
Ribosomal protein L9, C-terminal.
   
   0.756
A0A090MDG2
Ribosomal protein L17.
   
   0.749
Rpl14
Ribosomal protein L14; Belongs to the universal ribosomal protein uL14 family.
   
   0.746
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.