STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q015X0_OSTTATranslation elongation/initiation factor/Ribosomal, beta-barrel. (1016 aa)    
Predicted Functional Partners:
A0A090MAN9
G-protein beta WD-40 repeat.
   
 0.999
A0A090N4A3
RNA recognition motif, spliceosomal PrP8.
   
 0.999
A0A090N4I1
FACT complex subunit Spt16p/Cdc68p.
    
 0.999
A0A096PAZ0
Tetratricopeptide repeat.
   
 0.999
A0A096PBP8
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.995
A0A090M5R7
Ribonucleoprotein LSM domain,eukaryotic/archaea-type.
   
 0.993
A0A096P7J4
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
   
 0.993
A0A096P7C9
Small nuclear ribonucleoprotein G.
   
 0.992
A0A096P9N2
Small nuclear ribonucleoprotein Sm D2.
   
 0.992
A0A090M5W5
Prp31 C-terminal.
   
 0.991
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.