STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q017E1_OSTTAHelicase, C-terminal. (425 aa)    
Predicted Functional Partners:
A0A090M3U0
YjeF N-terminal domain.
    
 0.999
Q00YW6_OSTTA
Dcp1-like decapping.
   
 0.998
A0A090M8R3
NUDIX hydrolase, conserved site.
    
 0.997
A0A096P9F9
WD40/YVTN repeat-like-containing domain.
    
 0.993
LSM1
U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.
   
 0.990
A0A090N4W5
Ribonucleoprotein LSM domain,eukaryotic/archaea-type.
    
 0.988
A0A096P958
Like-Sm (LSM) domain.
   
 
 0.983
A0A090M7X3
CCR4-Not complex component, Not1, C-terminal.
   
 0.976
A0A090MDC6
Ribonuclease H-like domain.
   
 0.972
A0A090N4E8
RNA recognition motif domain, eukaryote.
    
 0.964
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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