STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q01DY3_OSTTAPrenyltransferase/squalene oxidase. (419 aa)    
Predicted Functional Partners:
A0A090N482
Protein prenyltransferase, alpha subunit.
    
 0.999
A0A090M8P4
CAAX amino terminal protease.
    
 0.984
Q01CR1_OSTTA
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
   
 0.951
Q00TX6_OSTTA
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.933
A0A096P7M1
Decaprenyl diphosphate synthase-like.
     
 0.927
Q00Y25_OSTTA
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
   
 0.923
A0A090M4E5
Squalene/phytoene synthase.
     
 0.804
A0A096P7T2
Squalene/phytoene synthase.
     
 0.804
Q018Q7_OSTTA
Squalene/phytoene synthase.
     
 0.804
A0A090LZR2
Cold-shock protein, DNA-binding.
    
 0.750
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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