STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rpl16Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (133 aa)    
Predicted Functional Partners:
rpl14
50S ribosomal protein L14, chloroplastic; Binds to 23S rRNA.
 
 0.975
A0A090M271
Ribosome maturation protein SBDS, N-terminal.
   
 
 0.967
rpl2
50S ribosomal protein L2, chloroplastic; Belongs to the universal ribosomal protein uL2 family.
 
 0.955
Rpl14
Ribosomal protein L14; Belongs to the universal ribosomal protein uL14 family.
  
 0.919
A0A090M4E6
Ribosomal protein S6.
   
 
 0.915
A0A090M8Z5
Ribosomal protein L25/L23.
  
 0.907
A0A096PAI1
Ribosomal protein L18/L5.
  
 0.907
rpl16
50S ribosomal protein L16, chloroplastic; Belongs to the universal ribosomal protein uL16 family.
  
  
 
0.903
A0A096P7B8
Ribosomal protein L30, ferredoxin-like fold domain.
  
 0.902
rpl36
50S ribosomal protein L36, chloroplastic.
  
 
 0.885
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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