STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps1130S ribosomal protein S11, chloroplastic; Belongs to the universal ribosomal protein uS11 family. (130 aa)    
Predicted Functional Partners:
Q00ZV2_OSTTA
Unnamed product; Belongs to the universal ribosomal protein uS5 family.
 
 0.976
A0A090M4E6
Ribosomal protein S6.
  
 0.969
A0A096PB13
Ribosomal protein S24/S35,mitochondrial,conserved domain.
   
 0.965
rps7
30S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.
  
 0.965
rps18
30S ribosomal protein S18, chloroplastic; Belongs to the bacterial ribosomal protein bS18 family.
   
 0.956
A0A090LZP7
Ribosomal protein S3, eukaryotic/archaeal.
  
 0.952
A0A090M5Z4
Ribosomal protein S5 domain 2-type fold,subgroup.
  
 0.952
A0A090N4J1
Ribosomal protein S19 conserved site; Belongs to the universal ribosomal protein uS19 family.
  
 0.952
rps9
30S ribosomal protein S9, chloroplastic.
  
 0.952
A0A090M3X6
Ribosomal protein S23/S29, mitochondrial.
   
 0.946
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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