STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl3650S ribosomal protein L36, chloroplastic. (37 aa)    
Predicted Functional Partners:
A0A090N4J1
Ribosomal protein S19 conserved site; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.975
A0A096P7B8
Ribosomal protein L30, ferredoxin-like fold domain.
  
 
 0.975
A0A096PAI1
Ribosomal protein L18/L5.
  
 
 0.974
A0A090M4E6
Ribosomal protein S6.
   
 
 0.972
A0A090LZP7
Ribosomal protein S3, eukaryotic/archaeal.
  
 
 0.971
A0A090M8Z5
Ribosomal protein L25/L23.
  
 
 0.967
Rps8
Ribosomal protein S8; Belongs to the universal ribosomal protein uS8 family.
  
 
 0.966
rps8
30S ribosomal protein S8, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
  
 
 0.966
A0A096PBL2
Ribosomal protein L33, conserved site.
  
 
 0.956
Q00VZ3_OSTTA
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.953
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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