STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0274317aa long hypothetical protein; May have GTPase activity. May also bind and hydrolyze ATP. May function as chaperone (By similarity). (317 aa)    
Predicted Functional Partners:
PH0275
147aa long hypothetical methylmalony-CoA mutase; Similar to owl:AF008569 percent identity: 60.000 in 114aa.
  
 0.996
PH1306
563aa long hypothetical methylmalonyl-CoA mutase; Similar to Swiss_Prot:P22033 percent identity:53.455 in 493aa; owl:CEZK1058 percent identity:52.998 in 521aa; Swiss_Prot:P16332 percent identity:52.642 in 493aa.
  
 0.986
PH0272
136aa long hypothetical protein; Similar to Swiss_Prot:P54540 percent identity: 44.186 in 130aa; owl:CED20305 percent identity: 37.600 in 126aa; Belongs to the methylmalonyl-CoA epimerase family.
  
 0.957
PH0276
206aa long hypothetical protein; Similar to PIR:B64386 percent identity: 52.284 in 200aa.
       0.443
PH1287
522aa long hypothetical methylmalonyl-CoA decarboxylase alpha chain; Similar to PIR:A49094 percent identity: 60.317 in 518aa; Swiss_Prot:P53003 percent identity: 58.513 in 529aa; owl:CELF52E42 percent identity: 56.719 in 519aa.
     
 0.408
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.