STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0574157aa long hypothetical alanyl-tRNA synthetase; Functions in trans to edit the amino acid moiety from mischarged charged Ser-tRNA(Ala). Has little activity against Gly- tRNA(Ala); Belongs to the class-II aminoacyl-tRNA synthetase family. Editing domain AlaX-S subfamily. (157 aa)    
Predicted Functional Partners:
PH0108
216aa long hypothetical alanyl-tRNA synthetase; Functions in trans to edit the amino acid moiety from mischarged charged Gly-tRNA(Ala) and Ser-tRNA(Ala). Belongs to the class-II aminoacyl-tRNA synthetase family. Editing domain AlaX-M subfamily.
  
  
 0.825
PH1969
404aa long hypothetical alanyl-tRNA synthetase; Functions in trans to edit the amino acid moiety from mischarged charged tRNA(Ala).
  
  
 0.817
PH0575
472aa long hypothetical protein; Similar to Swiss_Prot:P54181 percent identity:24.129 in 406aa; PIR:E64388 percent identity:26.471 in 412aa; PIR:JC4561 percent identity:25.077 in 329aa.
       0.741
PH0577
449aa long hypothetical damage-inducible protein; Similar to Swiss_Prot:P54181 percent identity: 25.290 in 435aa; PIR:E64388 percent identity: 25.935 in 434aa; PIR:JC4561 percent identity: 30.392 in 312aa.
       0.741
PH0578
457aa long hypothetical protein; Similar to owl:S76942 percent identity: 59.028 in 432aa.
       0.544
PH0290
431aa long hypothetical histidyl-tRNA synthetase; Similar to PIR:G64424 percent identity: 45.854 in 425aa; owl:HPAE0006251 percent identity: 33.577 in 418aa; Swiss_Prot:P46220 percent identity: 46.617 in 133aa; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 
 0.517
PH0579
204aa long hypothetical protein.
       0.430
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.