STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0078361aa long hypothetical D-aminopeptidase; Similar to owl:OADAMP percent identity: 39.650 in 352aa. (361 aa)    
Predicted Functional Partners:
PH1582
278aa long hypothetical dipeptide transport protein dppA; Similar to owl:BMU81371 percent identity:30.370 in 277aa; Swiss_Prot:P26902 percent identity:29.259 in 277aa.
   
 0.806
PH0076
282aa long hypothetical protein.
       0.773
PH0080
355aa long hypothetical protein; Similar to PIR:E64352 percent identity: 62.281 in 346aa.
       0.773
PH0809
283aa long hypothetical oligopeptide transport permease protein APPC; Similar to Swiss_Prot:P42063 percent identity: 38.846 in 264aa; owl:BFU645142 percent identity: 39.630 in 272aa; owl:HPAE0005486 percent identity: 40.075 in 275aa.
 
    0.628
PH0075
175aa long hypothetical cob(I)alamin adenosyltransferase; Similar to Swiss_Prot:P13040 percent identity: 33.140 in 172aa; Swiss_Prot:P31570 percent identity: 31.395 in 172aa; PIR:S75074 percent identity: 38.506 in 177aa.
       0.562
PH0724
274aa long hypothetical protein.
  
    0.424
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.