STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0089334aa long hypothetical protein. (334 aa)    
Predicted Functional Partners:
PH0090
462aa long hypothetical protein.
       0.819
PH0087
224aa long hypothetical protein.
       0.805
PH0088
336aa long hypothetical protein; Similar to PIR:C64352 percent identity:32.086 in 200aa. motif=tubulin-beta mRNA autoregulation signal.
       0.805
PH0092
821aa long hypothetical phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
       0.531
PH0086
135aa long hypothetical protein.
       0.465
PH0093
247aa long hypothetical protein; Motif=zinc carboxypeptidases, zinc-binding regions signatures.
       0.405
PH0094
580aa long hypothetical protein; Similar to PIR:C64334 percent identity: 54.175 in 526aa. motif=phosphopantetheine attachment site.
       0.405
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.