STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0096198aa long hypothetical protein. (198 aa)    
Predicted Functional Partners:
PH1134
310aa long hypothetical protein; Similar to PIR:B64440 percent identity: 51.485 in 203aa.
  
 
 0.632
PH0095
153aa long hypothetical purine phosphoribosyltransferase; Similar to owl:TTHASKAB2 percent identity:37.762 in 147aa.
       0.631
PH0093
247aa long hypothetical protein; Motif=zinc carboxypeptidases, zinc-binding regions signatures.
 
   
 0.569
PH1242
262aa long hypothetical pseudouridylate synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family.
   
 
 0.558
PH0094
580aa long hypothetical protein; Similar to PIR:C64334 percent identity: 54.175 in 526aa. motif=phosphopantetheine attachment site.
       0.490
PHS041
62aa long hypothetical 50S ribosomal proteinL37; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family.
  
   0.478
PH1770
116aa long hypothetical 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
  
   0.456
PH1642
198aa long hypothetical protein; Similar to PIR:B64410 percent identity: 44.681 in 190aa; owl:S59955 percent identity: 34.021 in 200aa; Swiss_Prot:P37872 percent identity: 36.170 in 192aa.
   
   0.406
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.