STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0104505aa long hypothetical protein. (505 aa)    
Predicted Functional Partners:
PH1116
582aa long hypothetical protein; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs.
  
    0.662
PH0106
124aa long hypothetical protein.
       0.572
PH0149
301aa long hypothetical 2-phosphoglycerate kinase; Similar to PIR:S41582 percent identity: 44.211 in 293aa; PIR:A64485 percent identity: 41.379 in 295aa. motif=ATP/GTP-binding site motif A (P-loop); bacterial extracellular solute-binding proteins, family 3 signature.
 
     0.483
PH1989
335aa long hypothetical protein; Similar to PIR:B64499 percent identity: 25.316 in 325aa.
 
     0.443
PH0794
237aa long hypothetical protein; Motif=arginase family signatures; Belongs to the arginase family.
 
   
 0.416
PH1619
370aa long hypothetical protein; Similar to PIR:A64383 percent identity: 38.796 in 309aa.
  
     0.408
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.