STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0131249aa long hypothetical protein; Similar to PIR:S62813 percent identity:37.736 in 108aa. (249 aa)    
Predicted Functional Partners:
PH0132
260aa long hypothetical transport protein; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity).
 0.998
PH1815
284aa long hypothetical cobalt transport ATP-binding protein; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity).
 0.994
PH0159
162aa long hypothetical protein; Probable biotin transporter; Belongs to the BioY family.
 
 0.993
PH1832
202aa long hypothetical protein; Similar to Swiss_Prot:P20298 percent identity: 83.562 in 146aa.
 
 
 0.913
PH1242
262aa long hypothetical pseudouridylate synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family.
  
  
 0.767
PH1117
220aa long hypothetical adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
  
  
 0.696
PH0034
335aa long hypothetical protein; Similar to PIR:E64499 percent identity: 38.835 in 323aa; PIR:S74983 percent identity: 34.568 in 341aa; Belongs to the UPF0284 family.
  
  
 0.645
PH0376
283aa long hypothetical cobalamin biosynthesis protein D; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
  
  
 0.515
PH0373
230aa long hypothetical cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
  
  
 0.510
PH0251
191aa long hypothetical protein.
     
 0.497
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.