STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0142289aa long hypothetical protein; Motif=soybean trypsin inhibitor (Kunitz) protease inhibitors family signature. (289 aa)    
Predicted Functional Partners:
PH0143
140aa long hypothetical protein.
      0.957
PH0863
642aa long hypothetical protein; Similar to Swiss_Prot:P19205 percent identity:31.532 in 231aa.
 
     0.923
PH0141
118aa long hypothetical protein.
       0.572
PH0594
622aa long hypothetical protein.
 
     0.514
PH0139
104aa long hypothetical protein.
       0.449
PH0140
158aa long hypothetical transcriptional regulator; Similar to PIR:C64390 percent identity: 41.429 in 140aa; owl:BSZ937674 percent identity: 35.556 in 135aa; PIR:H64318 percent identity: 34.507 in 142aa.
       0.449
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.