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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0221235aa long hypothetical protein. (235 aa)    
Predicted Functional Partners:
PH0055
103aa long hypothetical protein.
      
 0.649
PH0216
296aa long hypothetical protein.
      
 0.649
PHS009
65aa long hypothetical protein; Motif=prokaryotic membrane lipoprotein lipid attachment site.
      
 0.649
PH0428
105aa long hypothetical protein.
      
 0.649
PH1184
129aa long hypothetical protein.
      
 0.649
PH1187
128aa long hypothetical protein.
      
 0.649
PH1741
113aa long hypothetical protein.
      
 0.649
PH1861
112aa long hypothetical protein.
      
 0.649
PHS003
52aa long hypothetical protein; motif=ATP/GTP-binding site motif A (P-loop).
       0.520
PHS004
58aa long hypothetical protein; Similar to GENPEPT:Z47547 percent identity:50.000 in 38aa.
       0.482
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.