STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0271215aa long hypothetical protein. (215 aa)    
Predicted Functional Partners:
PH0270
294aa long hypothetical asparaginyl-tRNA synthetase; Similar to owl:STOMPS3GN percent identity:32.500 in 81aa; Swiss_Prot:P54263 percent identity:39.130 in 93aa.
  
  
 0.668
PH0268
630aa long hypothetical protein; Similar to PIR:B64308 percent identity: 40.959 in 474aa; PIR:E64421 percent identity: 37.209 in 269aa. motif=4Fe-4S ferredoxins, iron-sulfur binding region signature.
     
 0.441
PH0751
357aa long hypothetical protein.
  
     0.403
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.