STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0284252aa long hypothetical protein; Similar to PIR:F64469 percent identity: 74.370 in 239aa. motif=ATP/GTP-binding site motif A (P-loop); Belongs to the UPF0273 family. (252 aa)    
Predicted Functional Partners:
PH0283
279aa long hypothetical protein; Similar to PIR:D64431 percent identity: 56.173 in 163aa.
 
     0.901
PH0282
280aa long hypothetical protein; Similar to PIR:A64317 percent identity: 83.394 in 277aa; PIR:F64486 percent identity: 58.113 in 267aa.
       0.773
PH0213
171aa long hypothetical protein.
     
 0.722
PH0285
112aa long hypothetical methionyl-tRNA synthetase; Similar to PIR:F64457 percent identity:45.370 in 108aa; Swiss_Prot:P23395 percent identity:48.485 in 100aa.
       0.542
PH0800
1624aa long hypothetical reverse gyrase; Modifies the topological state of DNA by introducing positive supercoils in an ATP-dependent process. It cleaves transiently a single DNA strand and remains covalently bound to the 5' DNA end through a tyrosine residue. May be involved in rewinding the DNA strands in the regions of the chromosome that have opened up to allow transcription or replication (By similarity); In the N-terminal section; belongs to the DEAD box helicase family. DDVD subfamily.
 
     0.493
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.