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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0322219aa long hypothetical protein. (219 aa)    
Predicted Functional Partners:
PH0321
253aa long hypothetical protein.
       0.819
PH0320
177aa long hypothetical phosphoribosylaminoimidazole carboxylase catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
       0.668
PH0323
438aa long hypothetical phosphoribosylamide--glycine ligase; Similar to PIR:A64417 percent identity: 55.478 in 442aa; owl:HUMRPS4 percent identity: 33.738 in 424aa; Swiss_Prot:P12039 percent identity: 33.819 in 352aa. motif=prokaryotic membrane lipoprotein lipid attachment site.
       0.609
PH0324
383aa long hypothetical protein; Similar to PIR:H64316 percent identity: 44.847 in 382aa.
       0.586
PH0325
364aa long hypothetical protein.
       0.401
PH0326
1003aa long hypothetical protein.
       0.401
PH0328
320aa long hypothetical protein.
       0.401
PH0329
317aa long hypothetical protein; Similar to owl:BSU511154 percent identity:51.342 in 303aa; PIR:S75782 percent identity:49.823 in 286aa; PIR:S74593 percent identity:41.751 in 297aa.
       0.401
PH0331
406aa long hypothetical protein.
       0.401
PH0332
274aa long hypothetical protein.
       0.401
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.