STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0338329aa long hypothetical protein; Similar to PIR:F64388 percent identity:45.283 in 168aa; Swiss_Prot:P05409 percent identity:39.423 in 111aa. motif=N-6 Adenine-specific DNA methylases signature. (329 aa)    
Predicted Functional Partners:
PH0343
170aa long hypothetical protein; Catalyzes the formation of CDP-2,3-bis-(O-geranylgeranyl)-sn- glycerol (CDP-archaeol) from 2,3-bis-(O-geranylgeranyl)-sn-glycerol 1- phosphate (DGGGP) and CTP. This reaction is the third ether-bond- formation step in the biosynthesis of archaeal membrane lipids.
 
     0.811
PH0340
740aa long hypothetical protein; Similar to PIR:E64449 percent identity: 50.959 in 763aa.
  
    0.756
PH1786
201aa long hypothetical protein; Similar to PIR:C64416 percent identity: 50.521 in 194aa.
      
 0.701
PH1537
312aa long hypothetical nucleolar protein; Similar to owl:D908275 percent identity: 44.298 in 236aa; owl:A48998 percent identity: 38.376 in 277aa; Swiss_Prot:P40991 percent identity: 39.483 in 278aa; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.687
PH0337
210aa long hypothetical protein.
       0.664
PH1320
357aa long hypothetical protein; Similar to PIR:G64475 percent identity: 53.395 in 332aa; owl:S61973 percent identity: 31.615 in 291aa. motif=ATP/GTP-binding site motif A (P-loop).
 
    0.624
PH0336
335aa long hypothetical protein; Similar to PIR:S76512 percent identity: 38.191 in 201aa; Swiss_Prot:P11666 percent identity: 31.282 in 195aa; owl:HPAE0006071 percent identity: 29.958 in 240aa.
       0.582
PH0990
389aa long hypothetical protein; Similar to PIR:H64505 percent identity: 34.831 in 383aa.
  
    0.582
PH1710
138aa long hypothetical protein; Similar to PIR:G64464 percent identity: 32.061 in 134aa.
  
    0.575
PH1756
155aa long hypothetical 50S ribosomal protein L30; Similar to Swiss_Prot:P54046 percent identity: 66.667 in 152aa; Swiss_Prot:P14035 percent identity: 54.000 in 152aa; GENPEPT:Y07778 percent identity: 43.709 in 153aa. motif=ribosomal protein L30 signature.
  
    0.567
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.