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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0387422aa long hypothetical protein. (422 aa)    
Predicted Functional Partners:
PH0385
312aa long hypothetical protein; Similar to owl:BSU511154 percent identity: 45.151 in 300aa; PIR:S75782 percent identity: 48.029 in 282aa; PIR:S74593 percent identity: 43.607 in 311aa.
 
  
 0.913
PH0384
330aa long hypothetical protein; Similar to Swiss_Prot:P25769 percent identity:29.474 in 97aa.
  
    0.846
PH0383
633aa long hypothetical protein.
  
    0.826
PH0388
171aa long hypothetical protein.
       0.791
PH0326
1003aa long hypothetical protein.
  
  
 0.716
PH0382
176aa long hypothetical protein.
       0.631
PH0776
314aa long hypothetical protein; Similar to owl:BSU511154 percent identity: 51.678 in 300aa; PIR:S75782 percent identity: 50.355 in 284aa; PIR:S74593 percent identity: 48.980 in 299aa.
 
  
 0.600
PH0329
317aa long hypothetical protein; Similar to owl:BSU511154 percent identity:51.342 in 303aa; PIR:S75782 percent identity:49.823 in 286aa; PIR:S74593 percent identity:41.751 in 297aa.
 
  
 0.579
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.