STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0647110aa long hypothetical protein. (110 aa)    
Predicted Functional Partners:
PH0650
1136aa long hypothetical protein; Similar to PIR:E64397 percent identity: 49.580 in 363aa; owl:CLU77780 percent identity: 50.775 in 264aa; PIR:D64412 percent identity: 42.979 in 242aa. motif=ATP/GTP-binding site motif A (P-loop); tubulin subunits alpha, beta, and gamma signature.
       0.834
PH0648
475aa long hypothetical protein.
       0.676
PH0649
317aa long hypothetical protein.
       0.672
PH0653
358aa long hypothetical protein.
       0.598
PH0654
308aa long hypothetical protein.
       0.598
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.