STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0786669aa long hypothetical protein. (669 aa)    
Predicted Functional Partners:
PH0785
598aa long hypothetical protein.
       0.792
PHS025
74aa long hypothetical protein; Similar to GENPEPT:Z50854 percent identity: 34.483 in 58aa.
       0.442
PH0051
353aa long hypothetical dolichol-phosphate mannosyltransferase; Similar to PIR:S76171 percent identity: 41.499 in 362aa; PIR:S70643 percent identity: 43.779 in 231aa; Swiss_Prot:P54856 percent identity: 43.636 in 236aa.
 
   
 0.420
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.