STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0816368aa long hypothetical protein; Similar to owl:ECAE0001842 percent identity: 36.223 in 331aa; PIR:H64356 percent identity: 34.815 in 284aa. (368 aa)    
Predicted Functional Partners:
PH0817
153aa long hypothetical protein.
       0.792
PH1912
424aa long hypothetical protein; Similar to Swiss_Prot:P46838 percent identity: 43.029 in 425aa; owl:MTCY05A64 percent identity: 42.651 in 425aa; owl:MTCY05A65 percent identity: 43.961 in 426aa. motif=prokaryotic membrane lipoprotein lipid attachment site.
 
  
0.627
PH1984
228aa long hypothetical protein; Part of a potassium transport system.
  
  
 0.522
PH1813
496aa long hypothetical TRK system potassium uptake protein; Similar to PIR:D64485 percent identity: 37.556 in 468aa; Swiss_Prot:P23849 percent identity: 28.879 in 476aa; Swiss_Prot:P44843 percent identity: 33.226 in 321aa. motif=prokaryotic membrane lipoprotein lipid attachment site.
  
  
 0.517
PH0815
153aa long hypothetical protein.
       0.423
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.